You can set most settings in the Settings -> PDF Embedder page in WordPress. These apply to all embeds by default, but you can override the settings of individual embeds by manually adding shortcode parameters to the individual [pdf-embedder] shortcodes…
Hyperlinks in your PDFs are only supported in the Premium and Secure versions of the plugin, so please make sure you are definitely using one of those versions. If your links are all displayed as URLs e.g. http://mysite.com/... in the…
In the free version of the plugin, the only way to move between pages in a PDF Embedder embed is using the next/prev arrows in the toolbar. The Premium (and Premium Secure) version now has functionality allowing the user to…